Payroll processing

Payroll processing software

Run payroll with confidence, every cycle.

Sequifi handles the full payroll cycle, commissions, salaries, deductions, approvals, and final processing, in one automated workflow. Stop running payroll on spreadsheets and manual exports.

Capterra Best Value 2026Capterra Best Ease of Use 2026

Payroll

May cycle

Approved
TotalsEmployeesHistory
Commissions$571,24000
Overrides$88,96000
Reimbursements$8,40000

Net payout

$668,60000

Employees in this run84
Illustrative

Definition

What does payroll processing cover?

Sequifi runs the payroll itself. Commissions calculated in the same system arrive with salaries, overrides, reimbursements and deductions already on the run, W-2 employees and 1099 contractors go through the same cycle, and the figure that was approved is the figure that pays.

Trusted by commission-driven teams

Trusted by 20,000+ reps, managers, and operators

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Flex PWR logo
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Sea Port logo
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Sequifi customer logo
Aveyo logo
Flex PWR logo
GreenLine logo
Sea Port logo
Gainz Marketing logo
Sequifi customer logo
01How it works

Three steps, then it runs every cycle

Step 01

The run assembles itself

Commissions, salaries and reimbursements are already recorded when the cycle opens.

A payroll administrator at a laptopOps opens the cycle

Payroll

Cycle open

Assembling
CommissionsFrom this period
Salaries and hoursImported
Manual assemblyNone
Fig. 01.1

Step 02

Two people sign it off

A manager reviews, finance confirms, both looking at the same totals.

A finance lead reviewing totalsFinance approves it

Payroll

Approvals

In review
Manager reviewDone
Finance confirmsDone
3
Queued to payNext run
Fig. 01.2

Step 03

Then it pays

W-2 and 1099 in the same cycle, with stubs issued and taxes withheld.

A crew member checking their pay on a phoneThe team gets paid

Payroll

Paid

Complete
W-2 employees62
1099 contractors22
Pay stubsIssued
Fig. 01.3
02The problem

No more last-minute scrambles to get payroll Out

Payroll delays cost you credibility with your team. Errors cost you even more. Sequifi automates the preparation, approval, and execution steps so every cycle runs cleanly, on time, with the right numbers, and with a full audit trail behind it.

From payroll prep to final processing, fully automated

Sequifi pulls in commissions, advances, deductions, and salary data automatically each cycle. Your payroll team reviews, approves, and runs, without re-entering anything or reconciling across tools.

Payroll cycle

Ready to run

Approved
Employees in this run84
Commissions$571,240
Overrides$88,960
Reimbursements$8,400
Cycle completion100%

All items reviewed and approved

Fig. 02 — the cycle

03One run, end to end

From cycle open to paid

The run assembles itself from work already recorded, so closing a cycle is a review rather than a rebuild.

Fig. 01 — Lines, totalled
  1. Step 01

    The cycle opens

    84

    Everyone due in this run, W-2 and 1099 together.

  2. Step 02

    Commissions arrive

    $571,240

    Calculated in the same system, not imported from a spreadsheet.

  3. Step 03

    Everything else joins

    $97,360

    Overrides and reimbursements land on the same run.

  4. Step 04

    Approvals close it

    2 steps

    Manager review, then finance, with the totals in front of them.

  5. Step 05

    It pays

    $668,600

    On schedule, with pay stubs issued and taxes withheld.

Fig. 03Worked example

One run, every line

May cycle

84

Employees and contractors in the same run

Commissions

Calculated in Sequifi this period

$571,240.00

Overrides

Manager and branch, on the same deals

$88,960.00

Reimbursements

Approved expenses in this cycle

$8,400.00

Net payout

$668,600.00

Illustrative example, from a demo account. $571,240.00 plus $88,960.00 plus $8,400.00 is $668,600.00.

04What it does

The full payroll cycle, in one Workflow

01  ·  Cycle Automation

Payroll prep that runs itself

Every pay cycle, Sequifi automatically pulls in commission calculations, approved advances, salary data, and deductions, built into a complete payroll run ready for review. No manual data gathering, no spreadsheet prep, no chasing down numbers from other tools.

every pay type on its own line

Payroll totals in Sequifi, with commissions, overrides and reimbursements on separate lines
Real capture from a demo account

02  ·  Payroll Approvals

One approval gate before payroll goes out

Every payroll run goes through a structured review before processing, line items are visible and the right people sign off before anything moves. Finance and operations see the same data, and approval is tracked with a full audit trail.

Payroll

Approvals

In review
Manager reviewDone
Finance sign-offDone
3
QueuedNext run
Illustrative

03  ·  Finance Routing

Payroll connects directly to your finance workflow

Once payroll is approved, it routes to your bank, accounting system, and finance team automatically. No manual exports, no copying totals into another tool, the approved run is exactly what gets executed.

cycle after cycle

The yearly overview in Sequifi, showing payroll executed against work completed by month
Real capture from a demo account

04  ·  Salary Insights

Full cycle visibility for every payroll run

Track payroll totals, cost by department, and cycle timing across every pay period. Spot trends before they become problems and keep leadership aligned with real-time payroll data.

Reports

By office

Live
Phoenix
$241,800
Tucson
$186,400
Mesa
$140,400
Illustrative
A roofing rep checking their earnings on a phone at a job site
Why teams switch

Every cycle on time, every number accurate

Sequifi runs the same structured process every cycle, so your payroll team isn't scrambling, your employees aren't waiting, and errors don't make it through to final processing.

05At a glance

What payroll covers today

Salary RunsCommission SyncDeductionsCycle ApprovalTax WithholdingDirect DepositAudit Trail
Worker types
W-2 employees and 1099 contractors in the same run
Pay types
Salary, hourly, commissions, overrides, reimbursements, deductions
Cadence
Weekly, biweekly, semi-monthly or monthly
Approvals
Manager review then finance sign-off, on the same totals
Speed
Same-day or next-day delivery, chosen per run
After the run
Pay stubs issued, taxes withheld, reports by office and role
06Weighing it up

Comparing us with something else

Questions? We're glad you Asked.

Sequifi automates payroll data preparation, pulling in commission calculations, advances, deductions, and salary data each cycle, plus the approval workflow and final processing. Your team reviews and approves, and the system handles execution. No manual data entry, no spreadsheet reconciliation.

Commissions calculated in Sequifi flow directly into the payroll run, already approved, already itemized. There's no separate export or manual step. Everything that was approved in the commission workflow is ready for payroll automatically.

Yes. You can configure a sequential or parallel approval chain, for example, a sales manager approves commissions, then a finance lead approves the full run. Every approval is logged with a timestamp so you have a complete audit trail.

Every line in the run is visible before anyone approves it, broken out by employee and by pay type. Your team corrects it before payroll processes, not after.

Yes. You can run different payroll cycles for different teams, weekly commissions for field employees, bi-weekly for salaried staff, monthly for management, all from the same system with separate approval and processing workflows.

Most teams are running their first payroll cycle in Sequifi within 1-2 weeks. The onboarding team helps migrate your existing pay structures, deduction rules, and employee data so you're not rebuilding from scratch.

Request a Demo

See how Sequifi runs the full payroll cycle, commission sync, approvals, and processing, in one automated workflow. Book a quick walkthrough with our team.