Sequifi
vs Paychex

Payroll with commissions built in.

Paychex processes paychecks. Sequifi connects commissions, payroll, HR, and performance into one platform built for teams where commissions drive the business.

Sequifi
vs
Paychex logo
01The short answer
Paychex logo

Full-service payroll, with commission calculation in a third-party marketplace app.

Sequifi

Payroll with native splits, tiers, overrides and clawbacks.

Native commission engine
Calculate splits, tiers, overrides, and clawbacks, then flow straight to payroll.
Real-time rep visibility
Reps see earnings from their phone. Managers see team performance live.
Contractor-ready
1099 and W-2 workflows designed for how commission-driven teams actually operate.
Onboarding included
Get new reps from offer letter to first commission without switching tools.
02Side by side

Commission calculation

Paychex logoLimited

Through third-party marketplace apps such as Core Commissions

Sequifi

Built in, flowing straight into payroll

Payroll

Paychex logo

Full-service payroll

Sequifi

Full-service payroll with commissions built in

The right choice depends on how your team is paid.See how Sequifi handles commissions and payroll for your sales team.

See it on your comp plan
03Where it breaks down

Where Paychex splits the work

Paychex runs payroll. Commission calculation runs alongside it in a separate app.

  1. 1Commission calculation runs in a separate third-party app
  2. 2More systems between a closed deal and a paycheck
04Why Sequifi

Commissions, payroll and your reps in one place.

  • Native commission engine
  • Real-time rep visibility
  • Contractor-ready
  • Onboarding included

Built for commission-driven teams in solar, mortgage, roofing, pest control, fiber, HVAC, home services, turf, landscaping and more.

The Sequifi rep app showing pending pay broken into commissions, overrides, adjustments, reimbursement, reconciliation and deductions
05After the switch
“Fewer questions on payday. Reps understand their pay in advance, it's taken the pressure off leadership.”
Grant Miser, President, Aveyo Direct

Trusted by 20,000+ reps, managers, and operators

Aveyo logo
Flex PWR logo
GreenLine logo
Sea Port logo
Gainz Marketing logo
Sequifi customer logo
Aveyo logo
Flex PWR logo
GreenLine logo
Sea Port logo
Gainz Marketing logo
Sequifi customer logo
06Why teams choose Sequifi

Commission-powered payroll, not payroll with commissions duct-taped on

Commissions flow directly into payroll

No exporting, no spreadsheets, no reconciliation. Calculate and pay in one system.

Real-time visibility for everyone

Reps, managers, and operators all see what matters: earnings, performance, and payouts.

Built for how commission teams actually work

1099 workflows, territory logic, and org hierarchies.

Sequifi vs Paychex: common Questions

Paychex processes payroll. Sequifi calculates the commission that determines the payroll, then pays it in the same system. Teams using a payroll bureau alongside commission spreadsheets run a manual reconciliation every cycle; consolidating removes that step and the errors that come with it.

Yes. Splits, tiered rates, manager overrides, regional rules, bonuses, and chargebacks on cancelled jobs are configured in the platform rather than maintained in spreadsheets and entered as manual payroll adjustments.

Yes, for W-2 employees and 1099 contractors, including the mixed workforces typical of field sales organizations where setters and closers are contractors and operations staff are employees.

Reps get a mobile app with live earnings, job status, and pay history. Instead of learning what a job paid when the stub arrives, they can see the calculation as it happens, which cuts the volume of pay disputes reaching managers and payroll.

Implementation is measured in weeks, because commission structures common to commission-driven industries ship pre-built and are adjusted to your plan rather than modelled from scratch.

If you want a traditional full-service payroll bureau with PEO and HR outsourcing, a mostly salaried workforce, and no meaningful commission calculation requirement, Paychex provides services in a form that a self-serve platform does not replicate.

Your commission team deserves more than a payroll processor

Sequifi connects commissions, payroll, and HR into one platform, so you stop reconciling spreadsheets and start scaling.

Paychex and all other trademarks are the property of their respective owners and are used here for identification only. Comparisons reflect publicly available information at the time of writing and do not imply endorsement.